EnhancerDB
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  3. rs16824089[chr1:3230544]
Enhancers that have rs16824089[chr1:3230544]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3220368 3259315 enh11429
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs16824089[chr1:3230544]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3230395 3231174 TCF7L2 GTRD no Colon (HCT116) 107801846
chr1 3230536 3230552 POU4F2 JASPAR yes 26278473
chr1 3230544 3230557 DUXA JASPAR yes 26278474
Genes associated with rs16824089[chr1:3230544], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More