EnhancerDB
  1. Home
  2. SNP
  3. rs16824534[chr2:201631786]
Enhancers that have rs16824534[chr2:201631786]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 201603725 201634495 enh19115
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Placenta Colon (HCT116) Breast Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Thymus Heart
Transcript factors that have rs16824534[chr2:201631786]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 201631783 201631799 RFX2 JASPAR yes 80126281
chr2 201631783 201631799 RFX3 JASPAR yes 80126282
chr2 201631783 201631799 RFX5 JASPAR yes 80126283
chr2 201631784 201631803 RFX2 JASPAR yes 80126284
chr2 201631786 201631801 RFX5 JASPAR yes 80126285
Genes associated with rs16824534[chr2:201631786], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More