EnhancerDB
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  3. rs16829921[chr1:25013905]
Enhancers that have rs16829921[chr1:25013905]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25002143 25025115 enh11624
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs16829921[chr1:25013905]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25013891 25013911 PPARG JASPAR yes 27518229
chr1 25013892 25013906 RXRB JASPAR yes 27518230
chr1 25013892 25013906 RXRG JASPAR yes 27518231
chr1 25013902 25013921 PAX5 JASPAR yes 27518233
Genes associated with rs16829921[chr1:25013905], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More