EnhancerDB
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  3. rs16830797[chr1:43942237]
Enhancers that have rs16830797[chr1:43942237]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43924725 43950195 enh11811
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Stomach
Transcript factors that have rs16830797[chr1:43942237]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43942218 43942239 IRF1 JASPAR yes 28498452
chr1 43942223 43942238 MEF2A JASPAR yes 28498455
chr1 43942224 43942239 MEF2C JASPAR yes 28498456
chr1 43942225 43942237 MEF2A JASPAR yes 28498457
chr1 43942225 43942237 MEF2B JASPAR yes 28498458
chr1 43942225 43942237 MEF2D JASPAR yes 28498459
Genes associated with rs16830797[chr1:43942237], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More