EnhancerDB
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  3. rs16836414[chr1:154797272]
Enhancers that have rs16836414[chr1:154797272]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154772139 154826495 enh644
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs16836414[chr1:154797272]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154797261 154797275 PLAG1 JASPAR yes 32314978
chr1 154797272 154797282 GABPA JASPAR yes 32314979
Genes associated with rs16836414[chr1:154797272], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 154934774 154946871 - SHC1 ENSG00000160691.14 154946871 137502 Uterus 0.397865 1311