EnhancerDB
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  3. rs16845119[chr1:172886581]
Enhancers that have rs16845119[chr1:172886581]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs16845119[chr1:172886581]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172885278 172886593 TCF7L2 GTRD no Colon (HCT116) 21350442
chr1 172885352 172886710 TCF7L2 GTRD no Colon (HCT116) 21350444
chr1 172885797 172886583 TCF7L2 GTRD no Colon (HCT116) 21350448
chr1 172885797 172886774 TCF7L2 GTRD no Colon (HCT116) 21350449
chr1 172886581 172886585 ESR1 TRANSFAC yes 33166055
Genes associated with rs16845119[chr1:172886581], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More