EnhancerDB
  1. Home
  2. SNP
  3. rs16854249[chr2:216402732]
Enhancers that have rs16854249[chr2:216402732]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 216390469 216409675 enh19200
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (A549) Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Stomach
Transcript factors that have rs16854249[chr2:216402732]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 216402715 216402733 NFYA JASPAR yes 80778361
chr2 216402725 216402736 CDX2 JASPAR yes 80778362
chr2 216402727 216402736 CDX1 JASPAR yes 80778363
chr2 216402729 216402739 BARHL2 JASPAR yes 80778364
chr2 216402729 216402744 HNF1A JASPAR yes 80778365
chr2 216402730 216402743 HNF1B JASPAR yes 80778366
chr2 216402731 216402749 IRF2 JASPAR yes 80778367
chr2 216402732 216402753 IRF1 JASPAR yes 80778368
Genes associated with rs16854249[chr2:216402732], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More