EnhancerDB
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  3. rs16856139[chr1:205638464]
Enhancers that have rs16856139[chr1:205638464]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205631965 205647955 enh50152
Large Intestine Prostate (RWPE1) Liver Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
chr1 205638319 205638508 vista4757
VISTA
Transcript factors that have rs16856139[chr1:205638464]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205637971 205638507 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21372137
chr1 205637971 205638507 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107862387
chr1 205638039 205638508 ZNF274 GTRD no Liver (HepG2) 107862388
chr1 205638061 205638488 CTCF UCSC Txn Factor no Conserved 107862390
chr1 205638065 205638501 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21372139
chr1 205638065 205638501 MAX UCSC Txn Factor no Conserved 107862391
chr1 205638065 205638501 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107862392
chr1 205638075 205638511 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21372140
chr1 205638075 205638511 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107862393
chr1 205638076 205638512 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21372141
chr1 205638076 205638512 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107862394
chr1 205638077 205638737 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21372142
chr1 205638077 205638737 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107862395
chr1 205638077 205638737 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107862396
chr1 205638097 205638512 ZBTB33 GTRD no Lung (A549) 107862398
chr1 205638127 205638647 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21372145
chr1 205638127 205638647 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107862404
chr1 205638131 205638541 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21372147
chr1 205638131 205638541 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107862406
chr1 205638138 205638704 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21372148
chr1 205638138 205638704 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107862408
chr1 205638144 205638664 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21372150
chr1 205638144 205638664 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107862410
chr1 205638176 205638492 EBF1 UCSC Txn Factor no Conserved 107862419
chr1 205638179 205638563 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21372152
chr1 205638179 205638563 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107862420
chr1 205638179 205638589 RELA UCSC Txn Factor no Conserved 107862421
chr1 205638236 205638526 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21372155
chr1 205638236 205638526 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107862424
chr1 205638244 205638624 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21372157
chr1 205638244 205638624 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107862427
chr1 205638245 205638507 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21372158
chr1 205638245 205638507 RUNX3 UCSC Txn Factor no Conserved 107862428
chr1 205638245 205638507 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107862429
chr1 205638253 205638593 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21372159
chr1 205638253 205638593 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107862430
chr1 205638300 205638520 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21372160
chr1 205638300 205638520 SPI1 UCSC Txn Factor no Conserved 107862431
chr1 205638300 205638520 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107862432
Genes associated with rs16856139[chr1:205638464], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More