EnhancerDB
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  3. rs16866029[chr2:225390239]
Enhancers that have rs16866029[chr2:225390239]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 225380709 225396539 enh6176
Skin (Keratinocyte) Prostate (PC-3) Blood (T-cell) Lung (PC-9) Esophagus Astrocyte Liver Blood (OCI-LY7) Lung (A549) Blood (GM12878) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Breast Thymus Epithelial (MCF-7)
Transcript factors that have rs16866029[chr2:225390239]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 225390228 225390240 TEF JASPAR yes 81337846
chr2 225390231 225390239 FOXL1 JASPAR yes 81337847
chr2 225390235 225390239 YY1 TRANSFAC yes 81337848
chr2 225390237 225390247 NFATC3 JASPAR yes 81337849
chr2 225390239 225390246 NFATC2 JASPAR yes 81337850
Genes associated with rs16866029[chr2:225390239], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More