EnhancerDB
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  3. rs16977190[chr17:70368561]
Enhancers that have rs16977190[chr17:70368561]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs16977190[chr17:70368561]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70368551 70368563 NHLH1 JASPAR yes 55779229
chr17 70368552 70368562 NHLH1 JASPAR yes 55779230
chr17 70368552 70368562 TFAP4 JASPAR yes 55779231
Genes associated with rs16977190[chr17:70368561], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More