EnhancerDB
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  3. rs16977238[chr17:70427321]
Enhancers that have rs16977238[chr17:70427321]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs16977238[chr17:70427321]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70427208 70427568 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21785159
chr17 70427242 70427532 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21785160
chr17 70427284 70427514 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21785161
chr17 70427316 70427321 SP1 TRANSFAC yes 55787596
Genes associated with rs16977238[chr17:70427321], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More