EnhancerDB
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  3. rs16978669[chr19:12901468]
Enhancers that have rs16978669[chr19:12901468]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 12880762 12907555 enh5013
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Blood (Karpas-422) Muscle (Myoblast) Uterus Blood (T-cell)
Transcript factors that have rs16978669[chr19:12901468]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 12899245 12906365 POLR2A UCSC Txn Factor no Conserved 108386458
chr19 12899245 12906365 POLR2A UCSC Txn Factor no Conserved 108386459
chr19 12900749 12901473 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386647
chr19 12901111 12901542 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108386717
chr19 12901128 12901732 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849931
chr19 12901128 12901732 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108386718
chr19 12901128 12901732 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108386719
chr19 12901148 12901468 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849932
chr19 12901148 12901468 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108386721
chr19 12901319 12901935 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108386722
chr19 12901319 12901935 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108386723
chr19 12901329 12901793 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108386724
chr19 12901329 12901793 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108386725
chr19 12901456 12901477 ZNF263 JASPAR yes 70806714
chr19 12901456 12901477 ZNF263 JASPAR yes 112494400
chr19 12901460 12901481 ZNF263 JASPAR yes 70806715
chr19 12901460 12901481 ZNF263 JASPAR yes 112494401
chr19 12901463 12901478 PRDM1 JASPAR yes 112494403
Genes associated with rs16978669[chr19:12901468], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More