EnhancerDB
  1. Home
  2. SNP
  3. rs17007342[chr1:220472309]
Enhancers that have rs17007342[chr1:220472309]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220466225 220478595 enh12679
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Astrocyte Lung Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube) Neural Stem Cells (H9)
Transcript factors that have rs17007342[chr1:220472309]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220472304 220472318 GATA2 JASPAR yes 35482600
chr1 220472305 220472320 FOXP1 JASPAR yes 35482601
chr1 220472305 220472320 MEF2C JASPAR yes 35482602
chr1 220472305 220472326 IRF1 JASPAR yes 35482603
chr1 220472306 220472314 GATA3 JASPAR yes 35482604
chr1 220472308 220472319 FOXP2 JASPAR yes 35482605
chr1 220472308 220472322 IRF7 JASPAR yes 35482606
chr1 220472309 220472324 STAT2 JASPAR yes 35482607
chr1 220472309 220472327 IRF2 JASPAR yes 35482608
Genes associated with rs17007342[chr1:220472309], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More