EnhancerDB
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  3. rs172540[chr16:15995828]
Enhancers that have rs172540[chr16:15995828]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 15989540 15998735 enh31713
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs172540[chr16:15995828]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 15995521 15999182 ZBTB33 GTRD no Lung (A549) 108185052
chr16 15995810 15995829 PAX5 JASPAR yes 9749481
chr16 15995826 15995841 HNF4A JASPAR yes 9749483
Genes associated with rs172540[chr16:15995828], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More