EnhancerDB
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  3. rs1728172[chr17:41673108]
Enhancers that have rs1728172[chr17:41673108]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41660060 41681235 enh17172
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung Stomach Muscle (A673) Placenta Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
Transcript factors that have rs1728172[chr17:41673108]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41672874 41674089 ZNF274 GTRD no Cervix (HeLa-S3) 21761137
chr17 41673099 41673111 YY1 JASPAR yes 54358804
chr17 41673102 41673108 YY1 JASPAR yes 54358805
Genes associated with rs1728172[chr17:41673108], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 42112003 42144987 - LSM12 ENSG00000161654.5 42144987 438895 Esophagus 0.118746 15912