-
Home
- SNP
- rs1728387[chr16:86417262]
Enhancers that have rs1728387[chr16:86417262]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
86415065 |
86434607 |
enh31988 |
|
|
Transcript factors that have rs1728387[chr16:86417262]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
86416864
|
86417728
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108218284
|
|
|
chr16
|
86417178
|
86417757
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108218285
|
|
|
chr16
|
86417236
|
86417612
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
21732020
|
|
|
chr16
|
86417236
|
86417612
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108218286
|
|
|
chr16
|
86417257
|
86417267
|
ALX3
|
JASPAR
|
yes
|
|
12137946
|
|
|
chr16
|
86417257
|
86417267
|
ESX1
|
JASPAR
|
yes
|
|
12137947
|
|
|
chr16
|
86417257
|
86417267
|
GSX1
|
JASPAR
|
yes
|
|
12137948
|
|
|
chr16
|
86417257
|
86417267
|
GSX2
|
JASPAR
|
yes
|
|
12137949
|
|
|
chr16
|
86417257
|
86417267
|
LBX2
|
JASPAR
|
yes
|
|
12137950
|
|
|
chr16
|
86417257
|
86417267
|
MIXL1
|
JASPAR
|
yes
|
|
12137951
|
|
|
chr16
|
86417257
|
86417267
|
MNX1
|
JASPAR
|
yes
|
|
12137952
|
|
|
chr16
|
86417257
|
86417267
|
RAX
|
JASPAR
|
yes
|
|
12137953
|
|
|
chr16
|
86417258
|
86417262
|
H1TF2
|
TRANSFAC
|
yes
|
|
12137954
|
|
|
chr16
|
86417258
|
86417262
|
NFE
|
TRANSFAC
|
yes
|
|
12137955
|
|
|
chr16
|
86417258
|
86417262
|
SRF
|
TRANSFAC
|
yes
|
|
12137956
|
|
|
chr16
|
86417258
|
86417266
|
BARX1
|
JASPAR
|
yes
|
|
12137957
|
|
|
chr16
|
86417258
|
86417266
|
BSX
|
JASPAR
|
yes
|
|
12137958
|
|
|
chr16
|
86417258
|
86417266
|
DLX6
|
JASPAR
|
yes
|
|
12137959
|
|
|
chr16
|
86417258
|
86417266
|
ISX
|
JASPAR
|
yes
|
|
12137960
|
|
|
chr16
|
86417258
|
86417266
|
LBX1
|
JASPAR
|
yes
|
|
12137961
|
|
|
chr16
|
86417258
|
86417266
|
LHX9
|
JASPAR
|
yes
|
|
12137962
|
|
|
chr16
|
86417258
|
86417266
|
MSX1
|
JASPAR
|
yes
|
|
12137963
|
|
|
chr16
|
86417258
|
86417266
|
MSX2
|
JASPAR
|
yes
|
|
12137964
|
|
|
chr16
|
86417258
|
86417266
|
NKX6-2
|
JASPAR
|
yes
|
|
12137965
|
|
|
chr16
|
86417258
|
86417266
|
PRRX1
|
JASPAR
|
yes
|
|
12137966
|
|
|
chr16
|
86417258
|
86417266
|
RAX2
|
JASPAR
|
yes
|
|
12137967
|
|
|
chr16
|
86417258
|
86417266
|
SHOX
|
JASPAR
|
yes
|
|
12137968
|
|
|
chr16
|
86417258
|
86417266
|
UNCX
|
JASPAR
|
yes
|
|
12137969
|
|
|
chr16
|
86417258
|
86417268
|
HOXB13
|
JASPAR
|
yes
|
|
12137970
|
|
|
chr16
|
86417258
|
86417268
|
HOXD13
|
JASPAR
|
yes
|
|
12137971
|
|
Genes associated with rs1728387[chr16:86417262], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |