EnhancerDB
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  3. rs17297179[chr16:69641730]
Enhancers that have rs17297179[chr16:69641730]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 69621505 69657015 enh4116
Brain (SK-N-MC) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Lung (A549) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs17297179[chr16:69641730]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 69641718 69641736 IRF2 JASPAR yes 11286259
chr16 69641719 69641740 IRF1 JASPAR yes 11286260
chr16 69641721 69641736 PRDM1 JASPAR yes 11286261
chr16 69641721 69641736 STAT2 JASPAR yes 11286262
chr16 69641722 69641736 STAT1 JASPAR yes 11286263
chr16 69641723 69641735 IRF1 JASPAR yes 11286264
chr16 69641723 69641737 IRF7 JASPAR yes 11286265
chr16 69641723 69641737 IRF8 JASPAR yes 11286266
chr16 69641723 69641738 IRF9 JASPAR yes 11286267
chr16 69641730 69641738 FEV JASPAR yes 11286268
Genes associated with rs17297179[chr16:69641730], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 69373333 69377014 + NIP7 ENSG00000132603.9 69373333 264716 Spleen 0.2073 15007