EnhancerDB
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  3. rs1732236[chr12:52418032]
Enhancers that have rs1732236[chr12:52418032]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52415565 52430755 enh2354
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Blood (T-cell) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Pancreas Pancreas (Panc1) Uterus Thymus Heart
Transcript factors that have rs1732236[chr12:52418032]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52418026 52418038 FOXC2 JASPAR yes 120913350
chr12 52418028 52418036 FOXO3 JASPAR yes 120913351
chr12 52418031 52418043 BHLHE23 JASPAR yes 120913352
chr12 52418032 52418042 NEUROG2 JASPAR yes 120913353
Genes associated with rs1732236[chr12:52418032], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 53215194 53228079 - KRT79 ENSG00000185640.5 53228079 797162 Spleen 0.1842 12103