EnhancerDB
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  3. rs17478098[chr2:204449445]
Enhancers that have rs17478098[chr2:204449445]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 204433605 204453715 enh6121
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Lung
Transcript factors that have rs17478098[chr2:204449445]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 204449425 204449446 REST JASPAR yes 80242661
chr2 204449426 204449445 REST JASPAR yes 80242662
chr2 204449444 204449459 FOXP1 JASPAR yes 80242663
chr2 204449444 204449459 MEF2C JASPAR yes 80242664
chr2 204449444 204449465 IRF1 JASPAR yes 80242665
chr2 204449445 204449457 FOXC2 JASPAR yes 80242666
chr2 204449445 204449457 MEF2A JASPAR yes 80242667
chr2 204449445 204449457 MEF2B JASPAR yes 80242668
chr2 204449445 204449457 MEF2D JASPAR yes 80242669
Genes associated with rs17478098[chr2:204449445], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More