EnhancerDB
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  3. rs17540619[chr4:111086795]
Enhancers that have rs17540619[chr4:111086795]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 111082565 111089395 enh36926
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Colon (HCT116) Lung (PC-9) Spleen Thymus Epithelial (MCF-7)
chr4 111086740 111086853 vista45635
VISTA
Transcript factors that have rs17540619[chr4:111086795]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 111086559 111087472 GATA2 UCSC Txn Factor no Conserved 108533248
chr4 111086790 111086795 SP1 TRANSFAC yes 49269977
chr4 111086790 111086795 SP1 TRANSFAC yes 92027125
Genes associated with rs17540619[chr4:111086795], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More