EnhancerDB
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  3. rs17578618[chr12:107622599]
Enhancers that have rs17578618[chr12:107622599]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 107617627 107638255 enh29966
Skin (Keratinocyte) Astrocyte Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs17578618[chr12:107622599]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 107621634 107622677 ZNF143 GTRD no Epithelial (MCF-7) 21570363
chr12 107621656 107622640 ZNF143 GTRD no Epithelial (MCF-7) 21570365
chr12 107621861 107622800 ZNF143 GTRD no Epithelial (MCF-7) 21570367
chr12 107622598 107622608 HOXB2 JASPAR yes 123540735
chr12 107622598 107622608 HOXB3 JASPAR yes 123540736
chr12 107622598 107622608 MNX1 JASPAR yes 123540737
chr12 107622599 107622607 LBX1 JASPAR yes 123540738
chr12 107622599 107622607 PDX1 JASPAR yes 123540739
chr12 107622599 107622607 VAX1 JASPAR yes 123540740
chr12 107622599 107622607 VAX2 JASPAR yes 123540741
chr12 107622599 107622607 VSX1 JASPAR yes 123540742
chr12 107622599 107622607 VSX2 JASPAR yes 123540743
Genes associated with rs17578618[chr12:107622599], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More