EnhancerDB
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  3. rs17779661[chr17:70375230]
Enhancers that have rs17779661[chr17:70375230]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs17779661[chr17:70375230]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70375225 70375244 RFX2 JASPAR yes 55780202
chr17 70375226 70375236 MYF6 JASPAR yes 55780203
chr17 70375228 70375233 MYC TRANSFAC yes 55780204
chr17 70375229 70375245 RFX2 JASPAR yes 55780205
chr17 70375229 70375245 RFX3 JASPAR yes 55780206
chr17 70375229 70375245 RFX4 JASPAR yes 55780207
chr17 70375229 70375245 RFX5 JASPAR yes 55780208
chr17 70375230 70375249 RFX2 JASPAR yes 55780209
Genes associated with rs17779661[chr17:70375230], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More