EnhancerDB
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Enhancers that have rs17819079[chr17:53510488]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs17819079[chr17:53510488]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53510080 53510670 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108273027
chr17 53510311 53510815 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108273028
chr17 53510359 53510935 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108273029
chr17 53510359 53511034 TCF12 UCSC Txn Factor no Conserved 108273030
chr17 53510359 53511034 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108273031
chr17 53510375 53510865 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772541
chr17 53510375 53510865 FOXA2 UCSC Txn Factor no Conserved 108273032
chr17 53510375 53510865 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108273033
chr17 53510380 53510864 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108273034
chr17 53510383 53510673 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772542
chr17 53510383 53510673 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108273035
chr17 53510387 53510960 EP300 UCSC Txn Factor no Conserved 108273036
chr17 53510387 53510960 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108273037
chr17 53510388 53510932 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772543
chr17 53510388 53510932 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108273038
chr17 53510405 53510705 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772544
chr17 53510405 53510705 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108273039
chr17 53510409 53510885 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772545
chr17 53510409 53510885 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108273040
chr17 53510420 53511016 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21772546
chr17 53510420 53511016 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108273041
chr17 53510420 53511228 TCF7L2 UCSC Txn Factor no Conserved 108273042
chr17 53510438 53511089 GATA3 UCSC Txn Factor no Conserved 108273043
chr17 53510466 53510787 NR3C1 UCSC Txn Factor no Conserved 108273044
chr17 53510478 53510862 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108273045
chr17 53510481 53510921 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772547
chr17 53510481 53510921 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108273046
Genes associated with rs17819079[chr17:53510488], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More