EnhancerDB
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Enhancers that have rs1783578[chr11:72895842]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 72891925 72920095 enh1874
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs1783578[chr11:72895842]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 72895337 72895851 ZNF143 GTRD no Epithelial (MCF-7) 21502378
chr11 72895411 72896109 ZNF274 GTRD no Blood (GM12878) 21502379
chr11 72895482 72896061 ZNF274 GTRD no Blood (GM12878) 21502381
chr11 72895559 72896041 ZNF143 GTRD no Epithelial (MCF-7) 21502383
chr11 72895674 72896025 ZNF274 GTRD no Blood (GM12878) 21502384
chr11 72895833 72895847 ONECUT3 JASPAR yes 39736486
Genes associated with rs1783578[chr11:72895842], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr11 73019334 73080136 + ARHGEF17 ENSG00000110237.3 73019334 123492 Liver 0.33899 11225