EnhancerDB
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  3. rs17878920[chr1:12230394]
Enhancers that have rs17878920[chr1:12230394]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12228245 12248275 enh11508
Bone Marrow (K562) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Pancreas Uterus Thymus Heart
Transcript factors that have rs17878920[chr1:12230394]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12228999 12231813 ZNF274 GTRD no Bone Marrow (K562) 107802102
chr1 12230380 12230399 REST JASPAR yes 26805508
chr1 12230390 12230408 RARA JASPAR yes 26805510
chr1 12230392 12230401 THAP1 JASPAR yes 26805511
Genes associated with rs17878920[chr1:12230394], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More