EnhancerDB
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  3. rs17880321[chr1:12244237]
Enhancers that have rs17880321[chr1:12244237]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12228245 12248275 enh11508
Bone Marrow (K562) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Pancreas Uterus Thymus Heart
chr1 12243852 12244671 vista397
VISTA
Transcript factors that have rs17880321[chr1:12244237]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12244232 12244237 TFAP2A TRANSFAC yes 26807594
chr1 12244232 12244237 TFAP2A TRANSFAC yes 118232617
chr1 12244232 12244238 MZF1 JASPAR yes 26807595
chr1 12244232 12244238 MZF1 JASPAR yes 118232618
chr1 12244236 12244250 ZIC1 JASPAR yes 26807596
chr1 12244236 12244250 ZIC1 JASPAR yes 118232619
chr1 12244236 12244251 ZIC3 JASPAR yes 26807597
chr1 12244236 12244251 ZIC4 JASPAR yes 26807598
chr1 12244236 12244251 ZIC3 JASPAR yes 118232620
chr1 12244236 12244251 ZIC4 JASPAR yes 118232621
chr1 12244237 12244248 EBF1 JASPAR yes 26807599
chr1 12244237 12244248 EBF1 JASPAR yes 118232622
Genes associated with rs17880321[chr1:12244237], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More