EnhancerDB
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  3. rs17884090[chr17:40518396]
Enhancers that have rs17884090[chr17:40518396]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40510425 40522535 enh17159
Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Liver Astrocyte Bone (Osteoblast) Lung (A549) Stomach Placenta Thyroid Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs17884090[chr17:40518396]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40513077 40520281 ZBTB33 GTRD no Lung (A549) 21758607
chr17 40513077 40520281 ZBTB33 GTRD no Lung (A549) 108260425
chr17 40516182 40520263 ZBTB33 GTRD no Lung (A549) 21758608
chr17 40516182 40520263 ZBTB33 GTRD no Lung (A549) 108260426
chr17 40516250 40523339 ZNF274 GTRD no Cervix (HeLa-S3) 21758611
chr17 40516250 40523339 ZNF274 GTRD no Cervix (HeLa-S3) 108260430
chr17 40516257 40520245 ZBTB33 GTRD no Lung (A549) 21758612
chr17 40516257 40520245 ZBTB33 GTRD no Lung (A549) 108260431
chr17 40516339 40520134 ZBTB33 GTRD no Lung (A549) 21758618
chr17 40516339 40520134 ZBTB33 GTRD no Lung (A549) 108260442
chr17 40516398 40520314 ZBTB33 GTRD no Lung (A549) 21758624
chr17 40516398 40520314 ZBTB33 GTRD no Lung (A549) 108260458
chr17 40516420 40524798 ZBTB33 GTRD no Lung (A549) 21758628
chr17 40516420 40524798 ZBTB33 GTRD no Lung (A549) 108260464
chr17 40518393 40518407 SPI1 JASPAR yes 54298750
Genes associated with rs17884090[chr17:40518396], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More