EnhancerDB
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  3. rs180673988[chr1:25365164]
Enhancers that have rs180673988[chr1:25365164]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25355194 25369035 enh149
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Thymus Stomach
Transcript factors that have rs180673988[chr1:25365164]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25365150 25365164 POU1F1 JASPAR yes 27556922
chr1 25365151 25365172 IRF1 JASPAR yes 27556923
chr1 25365156 25365168 IRF1 JASPAR yes 27556924
Genes associated with rs180673988[chr1:25365164], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More