EnhancerDB
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  3. rs180678401[chr17:60265968]
Enhancers that have rs180678401[chr17:60265968]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 60253851 60272895 enh17275
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Stomach Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs180678401[chr17:60265968]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 60262748 60266466 ZNF143 GTRD no Epithelial (MCF-7) 21777950
chr17 60265930 60266400 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21777967
chr17 60265930 60266500 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21777968
chr17 60265956 60265977 IRF1 JASPAR yes 55191808
chr17 60265963 60265974 PROP1 JASPAR yes 55191809
Genes associated with rs180678401[chr17:60265968], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More