EnhancerDB
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  3. rs180685554[chr6:41949253]
Enhancers that have rs180685554[chr6:41949253]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41927525 41949869 enh23245
Bone Marrow (K562) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Astrocyte Blood (OCI-LY7) Stomach Placenta Adrenal Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs180685554[chr6:41949253]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41949247 41949257 SP1 JASPAR yes 101684237
chr6 41949250 41949255 SP1 TRANSFAC yes 101684238
Genes associated with rs180685554[chr6:41949253], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More