EnhancerDB
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  3. rs180701530[chr16:29609315]
Enhancers that have rs180701530[chr16:29609315]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29603958 29628535 enh3968
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs180701530[chr16:29609315]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29609297 29609318 IRF1 JASPAR yes 10266435
chr16 29609303 29609318 FOXP1 JASPAR yes 10266437
chr16 29609304 29609316 FOXC2 JASPAR yes 10266438
chr16 29609305 29609316 FOXC1 JASPAR yes 10266439
chr16 29609307 29609322 FOXP1 JASPAR yes 10266441
chr16 29609313 29609324 PROP1 JASPAR yes 10266442
chr16 29609314 29609318 YY1 TRANSFAC yes 10266443
chr16 29609315 29609325 HOXA13 JASPAR yes 10266444
chr16 29609315 29609325 HOXD13 JASPAR yes 10266445
chr16 29609315 29609326 HOXA10 JASPAR yes 10266446
Genes associated with rs180701530[chr16:29609315], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More