EnhancerDB
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  3. rs180707708[chr1:12553396]
Enhancers that have rs180707708[chr1:12553396]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12527565 12557135 enh11513
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Blood (T-cell) Liver Astrocyte Lung (PC-9) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Uterus Thymus Heart
Transcript factors that have rs180707708[chr1:12553396]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12553388 12553407 REST JASPAR yes 26826018
chr1 12553390 12553399 HIC2 JASPAR yes 26826019
chr1 12553392 12553402 SP1 JASPAR yes 26826020
chr1 12553393 12553397 LFA1 TRANSFAC yes 26826021
Genes associated with rs180707708[chr1:12553396], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More