EnhancerDB
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  3. rs180716612[chr1:202054339]
Enhancers that have rs180716612[chr1:202054339]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr1 202054141 202054434 vista4595
VISTA
Transcript factors that have rs180716612[chr1:202054339]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202054012 202054468 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366707
chr1 202054012 202054468 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857724
chr1 202054039 202054503 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21366709
chr1 202054039 202054503 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107857726
chr1 202054103 202054719 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366711
chr1 202054103 202054719 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857728
chr1 202054161 202054437 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366712
chr1 202054161 202054437 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857729
chr1 202054174 202054704 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366713
chr1 202054174 202054704 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857730
chr1 202054209 202054773 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366714
chr1 202054209 202054773 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857731
chr1 202054213 202054757 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366715
chr1 202054213 202054757 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857732
chr1 202054244 202054760 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21366716
chr1 202054244 202054760 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107857733
chr1 202054306 202059425 ZNF143 GTRD no Epithelial (MCF-7) 21366717
chr1 202054306 202059425 ZNF143 GTRD no Epithelial (MCF-7) 107857734
chr1 202054306 202059425 ZNF143 GTRD no Epithelial (MCF-7) 107857735
chr1 202054306 202059425 ZNF143 GTRD no Epithelial (MCF-7) 107857736
chr1 202054335 202054546 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21366718
chr1 202054335 202054546 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107857737
chr1 202054338 202054608 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21366719
chr1 202054338 202054608 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107857738
Genes associated with rs180716612[chr1:202054339], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More