EnhancerDB
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  3. rs180720585[chr1:212650453]
Enhancers that have rs180720585[chr1:212650453]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212648565 212664795 enh12641
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs180720585[chr1:212650453]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212650218 212650807 ZBTB33 GTRD no Brain (SK-N-SH) 21378782
chr1 212650218 212650807 ZBTB33 GTRD no Brain (SK-N-SH) 107868320
chr1 212650363 212650825 ZNF263 UCSC Txn Factor no Conserved 107868321
chr1 212650377 212650897 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107868322
chr1 212650388 212650852 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21378783
chr1 212650388 212650852 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107868323
chr1 212650416 212650936 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107868324
chr1 212650450 212650471 REST JASPAR yes 35127519
chr1 212650453 212650773 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107868325
Genes associated with rs180720585[chr1:212650453], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More