EnhancerDB
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  3. rs180777273[chr1:12664522]
Enhancers that have rs180777273[chr1:12664522]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12643625 12676355 enh11516
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs180777273[chr1:12664522]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12664515 12664524 THAP1 JASPAR yes 26838220
chr1 12664515 12664526 GCM1 JASPAR yes 26838221
chr1 12664516 12664526 GCM2 JASPAR yes 26838222
chr1 12664519 12664530 FLI1 JASPAR yes 26838223
chr1 12664520 12664531 SPDEF JASPAR yes 26838224
Genes associated with rs180777273[chr1:12664522], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More