EnhancerDB
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  3. rs180828552[chr1:9850495]
Enhancers that have rs180828552[chr1:9850495]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9840492 9854775 enh53
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Ovary Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Spleen Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs180828552[chr1:9850495]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9850481 9850496 HNF1A JASPAR yes 26678733
chr1 9850482 9850495 HNF1B JASPAR yes 26678735
chr1 9850482 9850496 POU4F1 JASPAR yes 26678736
chr1 9850482 9850498 POU4F3 JASPAR yes 26678737
chr1 9850494 9850498 NFE TRANSFAC yes 26678738
chr1 9850494 9850501 MEIS1 JASPAR yes 26678739
Genes associated with rs180828552[chr1:9850495], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More