EnhancerDB
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  3. rs180853871[chr1:28572591]
Enhancers that have rs180853871[chr1:28572591]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28563689 28580455 enh185
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Placenta Blood (Karpas-422) Muscle (Myoblast) Pancreas Uterus Thymus Heart
Transcript factors that have rs180853871[chr1:28572591]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28572560 28573772 TEF1 GTRD no Bone (Osteoblast) 107802656
chr1 28572585 28572595 GSC2 JASPAR yes 27753448
chr1 28572585 28572595 GSC JASPAR yes 27753449
chr1 28572586 28572594 OTX1 JASPAR yes 27753450
chr1 28572586 28572594 OTX2 JASPAR yes 27753451
chr1 28572586 28572595 PITX3 JASPAR yes 27753452
chr1 28572586 28572602 POU4F3 JASPAR yes 27753453
chr1 28572588 28572602 POU4F1 JASPAR yes 27753454
chr1 28572588 28572603 HNF1A JASPAR yes 27753455
chr1 28572589 28572603 POU4F1 JASPAR yes 27753456
chr1 28572589 28572605 POU4F3 JASPAR yes 27753457
chr1 28572591 28572601 PAX7 JASPAR yes 27753458
Genes associated with rs180853871[chr1:28572591], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More