EnhancerDB
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Enhancers that have rs180855253[chr16:3217834]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 3205284 3226809 enh62538
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Colon (HCT116) Pancreas Pancreas (Panc1) Uterus Blood (T-cell) Stomach
Transcript factors that have rs180855253[chr16:3217834]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 3217464 3217990 ZNF274 GTRD no Bone Marrow (K562) 21685621
chr16 3217515 3218234 ZNF274 GTRD no Liver (HepG2) 21685622
chr16 3217566 3218038 ZNF274 GTRD no Liver (HepG2) 21685623
chr16 3217580 3218245 ZNF274 GTRD no Liver (HepG2) 21685624
chr16 3217630 3218035 ZNF274 GTRD no Liver (HepG2) 21685625
chr16 3217634 3217880 ZNF274 GTRD no Bone Marrow (K562) 21685626
chr16 3217644 3218145 ZNF274 GTRD no Liver (HepG2) 21685627
chr16 3217694 3218071 ZNF274 GTRD no Liver (HepG2) 21685628
chr16 3217813 3217834 IRF1 JASPAR yes 9207898
chr16 3217818 3217839 IRF1 JASPAR yes 9207901
chr16 3217819 3217834 FOXP1 JASPAR yes 9207902
chr16 3217819 3217840 IRF1 JASPAR yes 9207903
chr16 3217820 3217835 FOXP1 JASPAR yes 9207904
chr16 3217820 3217841 IRF1 JASPAR yes 9207905
chr16 3217821 3217836 FOXP1 JASPAR yes 9207906
chr16 3217823 3217838 FOXP1 JASPAR yes 9207908
chr16 3217824 3217845 IRF1 JASPAR yes 9207909
chr16 3217825 3217840 FOXP1 JASPAR yes 9207910
chr16 3217826 3217847 IRF1 JASPAR yes 9207911
chr16 3217828 3217842 SPIC JASPAR yes 9207912
chr16 3217828 3217842 STAT1 JASPAR yes 9207913
chr16 3217828 3217843 STAT2 JASPAR yes 9207914
Genes associated with rs180855253[chr16:3217834], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More