EnhancerDB
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  3. rs180888729[chr16:27256375]
Enhancers that have rs180888729[chr16:27256375]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 27244385 27261714 enh16613
Bone Marrow (K562) Prostate (PC-3) Epithelial (MCF-7) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Uterus Thymus Heart
Transcript factors that have rs180888729[chr16:27256375]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 27255424 27258929 AR GTRD no Prostate (PC-3) 21700579
chr16 27255424 27258929 AR GTRD no Prostate (PC-3) 108190085
chr16 27256362 27256376 GLIS2 JASPAR yes 10179662
chr16 27256375 27256385 GSC2 JASPAR yes 10179663
chr16 27256375 27256385 GSC JASPAR yes 10179664
Genes associated with rs180888729[chr16:27256375], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More