EnhancerDB
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  3. rs180889138[chr2:238826660]
Enhancers that have rs180889138[chr2:238826660]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238823877 238854377 enh19404
Bone Marrow (K562) Brain (SK-N-SH) Epithelial (MCF-7) Prostate (RWPE1) Lung (PC-9) Esophagus Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Blood (T-cell) Heart
Transcript factors that have rs180889138[chr2:238826660]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238826655 238826671 POU4F2 JASPAR yes 82146871
chr2 238826655 238826671 POU4F3 JASPAR yes 82146872
chr2 238826658 238826668 GSX1 JASPAR yes 82146873
chr2 238826658 238826668 GSX2 JASPAR yes 82146874
chr2 238826659 238826667 LMX1A JASPAR yes 82146875
chr2 238826659 238826667 LMX1B JASPAR yes 82146876
chr2 238826659 238826667 NKX6-1 JASPAR yes 82146877
chr2 238826659 238826667 NKX6-2 JASPAR yes 82146878
chr2 238826659 238826667 VAX1 JASPAR yes 82146879
chr2 238826659 238826667 VAX2 JASPAR yes 82146880
chr2 238826659 238826667 VSX1 JASPAR yes 82146881
chr2 238826659 238826667 VSX2 JASPAR yes 82146882
Genes associated with rs180889138[chr2:238826660], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More