EnhancerDB
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  3. rs180918474[chr1:23955087]
Enhancers that have rs180918474[chr1:23955087]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23931559 23968435 enh128
Bone Marrow (K562) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs180918474[chr1:23955087]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23955074 23955093 PITX2 TRANSFAC yes 27450079
chr1 23955080 23955093 ZBTB18 JASPAR yes 27450080
chr1 23955081 23955093 PKNOX1 JASPAR yes 27450081
chr1 23955081 23955093 TGIF1 JASPAR yes 27450082
chr1 23955082 23955091 SNAI2 JASPAR yes 27450083
chr1 23955082 23955092 FIGLA JASPAR yes 27450084
chr1 23955082 23955092 ID4 JASPAR yes 27450085
chr1 23955082 23955092 TCF3 JASPAR yes 27450086
chr1 23955082 23955092 TCF4 JASPAR yes 27450087
chr1 23955084 23955093 ZEB1 JASPAR yes 27450088
chr1 23955084 23955094 TBX21 JASPAR yes 27450089
chr1 23955085 23955093 MGA JASPAR yes 27450090
chr1 23955085 23955093 TBX15 JASPAR yes 27450091
chr1 23955085 23955093 TBX1 JASPAR yes 27450092
chr1 23955085 23955093 TBX4 JASPAR yes 27450093
chr1 23955085 23955093 TBX5 JASPAR yes 27450094
chr1 23955085 23955095 TBR1 JASPAR yes 27450095
chr1 23955085 23955098 SMAD2 JASPAR yes 27450096
Genes associated with rs180918474[chr1:23955087], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More