EnhancerDB
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  3. rs181276478[chr17:39830774]
Enhancers that have rs181276478[chr17:39830774]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39816776 39838995 enh4409
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
Transcript factors that have rs181276478[chr17:39830774]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39830757 39830778 IRF1 JASPAR yes 54271783
chr17 39830762 39830774 IRF1 JASPAR yes 54271789
chr17 39830763 39830778 FOXP1 JASPAR yes 54271790
chr17 39830763 39830778 MEF2C JASPAR yes 54271791
chr17 39830763 39830784 IRF1 JASPAR yes 54271792
chr17 39830764 39830779 MEF2A JASPAR yes 54271793
chr17 39830765 39830777 FOXC2 JASPAR yes 54271794
chr17 39830765 39830777 MEF2A JASPAR yes 54271795
chr17 39830765 39830777 MEF2B JASPAR yes 54271796
chr17 39830765 39830777 MEF2D JASPAR yes 54271797
chr17 39830766 39830776 MEF2A JASPAR yes 54271798
chr17 39830768 39830780 IRF1 JASPAR yes 54271799
Genes associated with rs181276478[chr17:39830774], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More