EnhancerDB
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  3. rs181887825[chr5:171530036]
Enhancers that have rs181887825[chr5:171530036]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171526400 171541439 enh8877
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Prostate (RWPE1) Lung Heart
chr5 171529769 171530204 vista50119
VISTA
Transcript factors that have rs181887825[chr5:171530036]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171529828 171530228 FOS UCSC Txn Factor no Conserved 108537424
chr5 171529887 171530563 STAT1 UCSC Txn Factor no Conserved 108537425
chr5 171529929 171530219 STAT3 UCSC Txn Factor no Conserved 108537426
chr5 171530026 171530041 NFYB JASPAR yes 67762719
chr5 171530026 171530041 NFYB JASPAR yes 70760348
chr5 171530028 171530044 NFYA JASPAR yes 67762720
chr5 171530028 171530044 NFYA JASPAR yes 70760349
chr5 171530033 171530037 H1TF2 TRANSFAC yes 67762721
chr5 171530033 171530037 NFE TRANSFAC yes 67762722
chr5 171530033 171530037 SRF TRANSFAC yes 67762723
chr5 171530033 171530037 H1TF2 TRANSFAC yes 70760350
chr5 171530033 171530037 NFE TRANSFAC yes 70760351
chr5 171530033 171530037 SRF TRANSFAC yes 70760352
Genes associated with rs181887825[chr5:171530036], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More