EnhancerDB
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  3. rs1819960[chr12:47759771]
Enhancers that have rs1819960[chr12:47759771]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 47747943 47766515 enh2318
Prostate (PC-3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Blood (OCI-LY7) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs1819960[chr12:47759771]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 47757434 47759897 ZNF143 GTRD no Epithelial (MCF-7) 21543497
chr12 47758178 47759928 ZNF143 GTRD no Epithelial (MCF-7) 21543502
chr12 47758193 47760470 ZNF143 GTRD no Epithelial (MCF-7) 21543503
chr12 47758325 47760110 ZNF143 GTRD no Epithelial (MCF-7) 21543504
chr12 47758331 47759866 ZNF143 GTRD no Epithelial (MCF-7) 21543505
chr12 47758389 47759928 ZNF143 GTRD no Epithelial (MCF-7) 21543506
chr12 47758406 47760064 ZNF143 GTRD no Epithelial (MCF-7) 21543507
chr12 47758428 47759818 ZNF143 GTRD no Epithelial (MCF-7) 21543508
chr12 47758474 47759874 ZNF143 GTRD no Epithelial (MCF-7) 21543509
chr12 47758488 47759873 ZNF143 GTRD no Epithelial (MCF-7) 21543510
chr12 47758496 47759783 ZNF143 GTRD no Epithelial (MCF-7) 21543511
chr12 47758504 47759815 ZNF143 GTRD no Epithelial (MCF-7) 21543512
chr12 47758549 47760034 ZNF143 GTRD no Epithelial (MCF-7) 21543513
chr12 47758561 47759796 ZNF143 GTRD no Epithelial (MCF-7) 21543514
chr12 47758583 47759825 ZNF143 GTRD no Epithelial (MCF-7) 21543516
chr12 47758602 47760031 ZNF143 GTRD no Epithelial (MCF-7) 21543518
chr12 47758624 47759941 ZNF143 GTRD no Epithelial (MCF-7) 21543519
chr12 47758632 47759911 ZNF143 GTRD no Epithelial (MCF-7) 21543520
chr12 47758643 47759885 ZNF143 GTRD no Epithelial (MCF-7) 21543521
chr12 47758674 47759786 ZNF143 GTRD no Epithelial (MCF-7) 21543523
chr12 47758678 47759876 CTCF GTRD no Spleen 21543524
chr12 47758678 47759902 ZNF143 GTRD no Epithelial (MCF-7) 21543525
chr12 47758685 47759920 ZNF143 GTRD no Epithelial (MCF-7) 21543526
chr12 47758690 47759962 ZNF143 GTRD no Epithelial (MCF-7) 21543528
chr12 47758692 47759855 ZNF143 GTRD no Epithelial (MCF-7) 21543529
chr12 47758701 47759904 ZNF143 GTRD no Epithelial (MCF-7) 21543531
chr12 47758751 47759967 ZNF143 GTRD no Epithelial (MCF-7) 21543533
chr12 47758851 47759814 STAT3 GTRD no Blood (OCI-LY7) 21543535
chr12 47758887 47759928 ZNF143 GTRD no Epithelial (MCF-7) 21543538
chr12 47759762 47759773 ESRRB JASPAR yes 120701310
chr12 47759764 47759781 ESR1 JASPAR yes 120701311
chr12 47759764 47759782 ESR2 JASPAR yes 120701312
chr12 47759765 47759785 ESR1 JASPAR yes 120701313
chr12 47759766 47759777 HOXC11 JASPAR yes 120701314
chr12 47759766 47759777 HOXC12 JASPAR yes 120701315
chr12 47759766 47759777 HOXD12 JASPAR yes 120701316
chr12 47759767 47759777 HOXC10 JASPAR yes 120701317
chr12 47759767 47759777 HOXD11 JASPAR yes 120701318
Genes associated with rs1819960[chr12:47759771], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More