EnhancerDB
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  3. rs182250258[chr1:23921517]
Enhancers that have rs182250258[chr1:23921517]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23909968 23931495 enh127
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs182250258[chr1:23921517]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23921502 23921517 FOXA1 JASPAR yes 27445088
chr1 23921513 23921523 EMX1 JASPAR yes 27445089
chr1 23921513 23921523 EVX1 JASPAR yes 27445090
chr1 23921513 23921523 EVX2 JASPAR yes 27445091
chr1 23921513 23921523 HOXA2 JASPAR yes 27445092
chr1 23921513 23921523 HOXB3 JASPAR yes 27445093
chr1 23921513 23921523 NOTO JASPAR yes 27445094
chr1 23921514 23921524 POU6F2 JASPAR yes 27445095
chr1 23921517 23921528 NFE2L2 JASPAR yes 27445096
Genes associated with rs182250258[chr1:23921517], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More