EnhancerDB
  1. Home
  2. SNP
  3. rs182341679[chr1:55329413]
Enhancers that have rs182341679[chr1:55329413]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55319988 55335735 enh370
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Liver Astrocyte Bone (Osteoblast) Lung (A549) Stomach Placenta Colon (HCT116) Adrenal Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs182341679[chr1:55329413]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55329400 55329414 TCF7L2 JASPAR yes 29002346
chr1 55329408 55329418 HINFP JASPAR yes 29002348
chr1 55329409 55329428 RFX2 JASPAR yes 29002349
chr1 55329413 55329429 RFX2 JASPAR yes 29002350
chr1 55329413 55329429 RFX3 JASPAR yes 29002351
chr1 55329413 55329429 RFX4 JASPAR yes 29002352
chr1 55329413 55329429 RFX5 JASPAR yes 29002353
Genes associated with rs182341679[chr1:55329413], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More