EnhancerDB
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  3. rs182605905[chr17:80466039]
Enhancers that have rs182605905[chr17:80466039]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80448407 80467804 enh4648
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs182605905[chr17:80466039]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80465637 80466252 TCF7L2 GTRD no Colon (HCT116) 21800707
chr17 80465637 80466835 ZNF143 GTRD no Epithelial (MCF-7) 21800708
chr17 80465640 80466133 TCF7L2 GTRD no Colon (HCT116) 21800709
chr17 80465648 80466877 ZNF143 GTRD no Epithelial (MCF-7) 21800710
chr17 80466035 80466054 PAX5 JASPAR yes 56369357
Genes associated with rs182605905[chr17:80466039], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More