EnhancerDB
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  3. rs1828958[chr12:92934209]
Enhancers that have rs1828958[chr12:92934209]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 92931041 92959835 enh14884
Liver Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
chr12 92933886 92934489 vista14418
VISTA
Transcript factors that have rs1828958[chr12:92934209]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 92933879 92934259 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21562586
chr12 92933879 92934259 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108050322
chr12 92934043 92934453 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21562588
chr12 92934043 92934453 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108050324
chr12 92934053 92934437 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21562589
chr12 92934053 92934437 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108050325
chr12 92934123 92934413 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21562590
chr12 92934123 92934413 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108050326
chr12 92934199 92934209 SREBF2 JASPAR yes 82453607
chr12 92934199 92934209 SREBF2 JASPAR yes 122779340
Genes associated with rs1828958[chr12:92934209], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More