EnhancerDB
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  3. rs182954015[chr1:230220898]
Enhancers that have rs182954015[chr1:230220898]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230203175 230225395 enh12769
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs182954015[chr1:230220898]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230220260 230221087 ZNF274 GTRD no Bone Marrow (K562) 107878375
chr1 230220260 230221087 ZNF274 GTRD no Bone Marrow (K562) 107878376
chr1 230220295 230220991 ZNF274 GTRD no Cervix (HeLa-S3) 21391248
chr1 230220295 230220991 ZNF274 GTRD no Cervix (HeLa-S3) 107878390
chr1 230220295 230220991 ZNF274 GTRD no Cervix (HeLa-S3) 107878391
chr1 230220323 230220916 ZNF274 GTRD no Bone Marrow (K562) 107878396
chr1 230220323 230220916 ZNF274 GTRD no Bone Marrow (K562) 107878397
chr1 230220471 230220932 ZNF274 GTRD no Liver (HepG2) 21391268
chr1 230220471 230220932 ZNF274 GTRD no Liver (HepG2) 107878461
chr1 230220554 230221476 ZNF274 GTRD no Blood (GM12878) 107878465
chr1 230220889 230220899 HOXA13 JASPAR yes 36019796
chr1 230220889 230220899 HOXB13 JASPAR yes 36019797
chr1 230220889 230220899 HOXD13 JASPAR yes 36019798
chr1 230220889 230220900 HOXA10 JASPAR yes 36019799
chr1 230220889 230220904 HNF1A JASPAR yes 36019800
chr1 230220889 230220904 MEF2A JASPAR yes 36019801
chr1 230220890 230220899 CDX1 JASPAR yes 36019802
chr1 230220890 230220901 CDX2 JASPAR yes 36019803
chr1 230220890 230220903 HNF1B JASPAR yes 36019804
chr1 230220891 230220903 MEF2A JASPAR yes 36019805
chr1 230220891 230220903 MEF2B JASPAR yes 36019806
chr1 230220891 230220903 MEF2D JASPAR yes 36019807
chr1 230220892 230220902 MEF2A JASPAR yes 36019808
Genes associated with rs182954015[chr1:230220898], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More