EnhancerDB
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  3. rs1829920[chr2:225387320]
Enhancers that have rs1829920[chr2:225387320]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 225380709 225396539 enh6176
Skin (Keratinocyte) Prostate (PC-3) Blood (T-cell) Lung (PC-9) Esophagus Astrocyte Liver Blood (OCI-LY7) Lung (A549) Blood (GM12878) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Breast Thymus Epithelial (MCF-7)
Transcript factors that have rs1829920[chr2:225387320]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 225387315 225387320 SP1 TRANSFAC yes 81337377
chr2 225387320 225387335 JUND JASPAR yes 81337378
Genes associated with rs1829920[chr2:225387320], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More